CDS

Accession Number TCMCG081C16111
gbkey CDS
Protein Id XP_002274714.3
Location join(19800961..19800998,19801417..19801606,19801684..19801784,19802421..19802500,19802678..19802911,19803107..19803432,19804395..19804505,19806359..19806496,19806635..19806682,19806990..19807070,19807320..19807479,19808052..19808173)
Gene LOC100257338
GeneID 100257338
Organism Vitis vinifera

Protein

Length 542aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002274678.4
Definition PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category H
Description Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis
KEGG_TC -
KEGG_Module -
KEGG_Reaction R00942        [VIEW IN KEGG]
R02237        [VIEW IN KEGG]
R04241        [VIEW IN KEGG]
KEGG_rclass RC00064        [VIEW IN KEGG]
RC00090        [VIEW IN KEGG]
RC00162        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01930        [VIEW IN KEGG]
EC 6.3.2.17        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00790        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01523        [VIEW IN KEGG]
map00790        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01523        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004326        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006575        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006760        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009108        [VIEW IN EMBL-EBI]
GO:0009396        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009853        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016879        [VIEW IN EMBL-EBI]
GO:0016881        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042398        [VIEW IN EMBL-EBI]
GO:0042558        [VIEW IN EMBL-EBI]
GO:0042559        [VIEW IN EMBL-EBI]
GO:0043094        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046900        [VIEW IN EMBL-EBI]
GO:0046901        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTTTAGGCTTTCAGAGCTTCATTAATCTTACACATTTTGCAGTAACTCCTCTGAGTTTGAGAGCCAGAACGTTGGTTTATCTGAAAGCTAGAACAACAGGGTCTCAAAGACTCGTTTGCTACTCATCGGAGATCGAATCGTCATCAACTCTTACTAGCAAGAAAGTTAAGAAAGAGAGTAGTTCCATGAGTAGTAGGCCAAATACCAAAAAGGGTGTTATCGAGGAAAATGCATCCAGAACCCAATCGATTGAAATTCAGAGCATCAGGGATGATCCGGCTAAAGTCAAGGCAATGACGGTCCAAGAACTGACAACAACATTAAGGAGTGTTGGAGTCCCTGCCAAAGGCTGTAAACGAGATCTCGTGTTGGCATTGAAATCGTTCCTGGACAATAAAGCCTCTGATGAAAGTTCTCAGGCAGAAGAACAGCTGGAATTAAATATTTTGTCCAAGAGGAAGGCCAAGAATTTATCTGTTGAAGACCATGAGCAAAATGTCAACATTGTTTCAGATGCTTCTGGGCTTAAACAGAGTAAGAGAAGGGCAAAACAGTCTCCTGTTGAGGCTAAAATTGAGGTCAATACTGAAATCATCAATGAAAAAGAGAAGCCATCAATCAAAAATAAGGAGGCTTCAGGCAACAAGCTCTATCAGGGGGAGAGAAAAGCATCCTCAAGAAGTAGTATCAAACAGATTGCAGTTACTGAAAGAATTGATATATCTATGAACGAACCTGAACCATGGACTGTTCTTACCCACAAGAAGCCTCAAGAGGGCTGGATTCCATATAACCCCAGGACCATGAGGCCTCCTCCTCTTACAGGGGATGCCAAGTTTGTAAAACTAATGTCTTGGAATGTTAATGGGTTAAGAGGCTTGCTGAAATCGAAGGGCTTCTCTGCACTGAAACTGGCACAAAGAGAAGATTTTGATGTTTTGTCTCTGCAAGAGACCAAACTGCAGGAGAAGGATGTGGAAGCAATCAAACAGAGTGTCATAGAGGGCTATGAGAATAGTTTTTGGACATGTAGTGTTTCCAAACTTGGATATTCTGGTACTGCAATTATTTCACGGATAAAGCCACTTTCAGTCAGATATGGTCTAGGCATATCAGATCATGATAGTGAAGGACGGCTCCTGACAGCAGAGTTTGAATCTTTTTATTTGTTAAGTGGATATGTTCCTAATTCTGGAGATGGTTTGAAAAGACTGTCATATAGGGTTACACAATGGGATTCAGCTCTTGGAAGTTATATGAAAGAGCTCGAAAAGTCAAAACCTGTCATTTTGACTGGTGATCTAAACTGTGCTCATCAAGAGATAGACATTCATGATCCTGCTGGAAATAGAAGAAGTGCTGGGTTTACTGACGAAGAAAGACAATCGTTGGAGAAGAATTTCTTATCAAAGGGTTTTGTGGATAGCTTTAGAAAACAACACCCTGGTGTTGTTGGCTATACTTACTGGGGTTATAGGAATGGCTGCCGCAAATCTAATAAAGGGTGGCGGCTGGACTACTTCCTTGTCTCAGAATCCATAGCTGACAAGGTTCATGACTCATACATCCTCCCTGACATTGGTGGAAGTGATCATTGTCCAATTGGCCTCGTTCTCAAGCTCTAG
Protein:  
MILGFQSFINLTHFAVTPLSLRARTLVYLKARTTGSQRLVCYSSEIESSSTLTSKKVKKESSSMSSRPNTKKGVIEENASRTQSIEIQSIRDDPAKVKAMTVQELTTTLRSVGVPAKGCKRDLVLALKSFLDNKASDESSQAEEQLELNILSKRKAKNLSVEDHEQNVNIVSDASGLKQSKRRAKQSPVEAKIEVNTEIINEKEKPSIKNKEASGNKLYQGERKASSRSSIKQIAVTERIDISMNEPEPWTVLTHKKPQEGWIPYNPRTMRPPPLTGDAKFVKLMSWNVNGLRGLLKSKGFSALKLAQREDFDVLSLQETKLQEKDVEAIKQSVIEGYENSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDSEGRLLTAEFESFYLLSGYVPNSGDGLKRLSYRVTQWDSALGSYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFRKQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVHDSYILPDIGGSDHCPIGLVLKL